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    Alkylation of morpholine and prolidine by phthalimide substituted Ru(II)- NHC catalysts
    (Pergamon-Elsevier Science Ltd, 2024) Akkoc, Mitat; Gurbuz, Nevin; Ozdemir, Ismail
    In this study, a series of benzimidazolium salts and silver-benimidazol-2-ylidene complexes were synthesized. The obtained silver complexes were converted into Ru(II)- benimidazol-2-ylidene complex using the transmetallation method. After elucidating the structures of these Ru(II)-NHC compounds, the synthesized ruthenium complexes were used in the alkylation reaction of cyclic amines to synthesize valuable derivatives such as pyrrolidine and morpholine. Pyrrolidine derivatives are extensively studied for their antimicrobial, antiviral, antifungal, anticancer, anti-inflammatory, anticonvulsant, cholinesterase inhibition, and carbonic anhydrase inhibition properties. Morpholine derivatives are particularly studied in the context of central nervous system (CNS) diseases. The yield of the catalytic products obtained was determined by GC. High selectivity and yield were achieved in the alkylation reactions of heterocyclic structures.
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    CT-DNA- and BSA-binding, molecular docking interactions, and ADME properties of new PEPPSI-type palladium complexes
    (Elsevier, 2026) Sahin, Neslihan; Ustun, Elvan; Tahir, Muhammad Nawaz; Arici, Cengiz; Gurbuz, Nevin; Ozdemir, Ismail; Semeril, David
    The synthesis and characterization of three novel PEPPSI-type complexes, dichloro[1-allyl-3-(2-methylbenzyl)benzimidazole-2-ylidene]pyridine palladium(II) (2a), dichloro[1-allyl-3-(2-chlorobenzyl)-benzimidazole-2ylidene]pyridine palladium(II) (2b) and dichloro[1-allyl-3-(3-methylbenzyl)-benzimidazole-2-ylidene]pyridine palladium(II) (2c) were carried out. The structure of the complexes was elucidated by elemental analysis, NMR and IR spectroscopy. In addition, the structure of complex 2c was confirmed through single-crystal X-ray diffraction. BSA and DNA binding properties of the designed complexes were evaluated spectroscopically by Benesi-Hildebrand method. According to both DNA- and BSA-binding experiments, 2b has the best binding affinity with 3.06x104 M- 1, and 2.5x104 M- 1, respectively. Also, the bindings of the complexes were also evaluated by molecular docking methods, which gave accordance results with experimental ones. Additionally, complexes were analyzed ADME properties to get insight into drug-likeness, and pharmacokinetic evaluation and the complexes were coherent with Veber and Egan rules.
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    Systematic study on the catalytic performance of NHC-ligated silver(I) complexes
    (Elsevier Science Sa, 2026) Akkoc, Mitat; Onder, Belgin; Evren, Enes; Karaca, Emine Ozge; Gurbuz, Nevin; Ozdemir, Ismail
    This study reports the synthesis of novel N-heterocyclic carbene (NHC) ligated silver(I) complexes, which are gaining increasing attention as versatile catalysts in organic synthesis. The structural properties of the synthesized compounds were elucidated in detail using various spectroscopic and thermal analysis techniques, including FTIR, NMR spectroscopy, and melting point determination. These analyses confirmed the successful formation of the complexes and verified that they exhibited the expected molecular structures. The low cost and unique chemical properties of silver make it an attractive alternative to other transition metals. In this context, the catalytic potential of the synthesized Ag-NHC complexes was investigated in the A3 coupling reaction, a key method for the synthesis of propargylamines. The A3 reaction is a crucial step in the formation of nitrogencontaining compounds of significant importance in pharmaceutical and natural product chemistry. Experimental results demonstrated that the Ag-NHC complexes effectively catalyzed the reaction, leading to high yields. In conclusion, this research successfully achieved the synthesis and characterization of new Ag-NHC complexes. Following the acquisition of structural analysis data, their catalytic activity in the A3 coupling reaction was successfully investigated.